Bioconductor version: 2.10
Rtreemix is a package that offers an environment for estimating the mutagenetic trees mixture models from cross-sectional data and using them for various predictions. It includes functions for fitting the trees mixture models, likelihood computations, model comparisons, waiting time estimations, stability analysis, etc.
Author: Jasmina Bogojeska
Maintainer: Jasmina Bogojeska <jasmina at mpi-inf.mpg.de>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("Rtreemix")
To cite this package in a publication, start R and enter:
citation("Rtreemix")
R Script | ClassDiagram.pdf | |
R Script | ExtendedVignette.pdf | |
R Script | Rtreemix | |
R Script | topologies.pdf | |
Reference Manual |
biocViews | Bioinformatics, Software |
Depends | R (>= 2.5.0), methods, graph, Biobase |
Imports | methods, graph, Biobase, Hmisc |
Suggests | Rgraphviz |
System Requirements | |
License | LGPL |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Version | 1.18.0 |
Since | Bioconductor 2.2 (R-2.7) |
Package Source | Rtreemix_1.18.0.tar.gz |
Windows Binary | Rtreemix_1.18.0.zip (32- & 64-bit) |
MacOS 10.5 (Leopard) binary | Rtreemix_1.18.0.tgz |
Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!