RchyOptimyx

Optimyzed Cellular Hierarchies for Flow Cytometry

Bioconductor version: 2.10

Constructs a hierarchy of cells using flow cytometry for maximization of an external variable (e.g., a clinical outcome or a cytokine response).

Author: Adrin Jalali, Nima Aghaeepour

Maintainer: Adrin Jalali <adrin.jalali at gmail.com>, Nima Aghaeepour <naghaeep at bccrc.ca>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("RchyOptimyx")

To cite this package in a publication, start R and enter:

    citation("RchyOptimyx")

Documentation

PDF R Script flowType package
PDF   Reference Manual
Text   NEWS

Details

biocViews FlowCytometry, Software
Depends R (>= 2.10)
Imports Rgraphviz, sfsmisc, graphics, methods, graph, grDevices
Suggests flowCore, flowType
System Requirements
License Artistic-2.0
URL
Depends On Me
Imports Me
Suggests Me
Version 1.0.0
Since Bioconductor 2.10 (R-2.15)

Package Downloads

Package Source RchyOptimyx_1.0.0.tar.gz
Windows Binary RchyOptimyx_1.0.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary RchyOptimyx_1.0.0.tgz
Package Downloads Report Download Stats

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Fred Hutchinson Cancer Research Center