DNAcopy

DNA copy number data analysis

Bioconductor version: 2.10

Segments DNA copy number data using circular binary segmentation to detect regions with abnormal copy number

Author: Venkatraman E. Seshan, Adam Olshen

Maintainer: Venkatraman E. Seshan <seshanv at mskcc.org>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("DNAcopy")

To cite this package in a publication, start R and enter:

    citation("DNAcopy")

PDF	R Script	DNAcopy
PDF		Reference Manual

biocViews	CopyNumberVariants, Microarray, Software
Depends
Imports
Suggests
System Requirements
License	GPL (>= 2)
URL
Depends On Me	CGHcall, cghMCR, Clonality, CNAnorm, CRImage, snapCGH
Imports Me	Clonality, cn.farms, genoset, GWASTools, MinimumDistance, Repitools, snapCGH
Suggests Me	ADaCGH2, beadarraySNP, Clonality, cn.mops, fastseg, Repitools
Version	1.30.0
Since	Bioconductor 1.6 (R-2.1) or earlier

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