DECIPHER

Database Enabled Code for Ideal Probe Hybridization Employing R

Bioconductor version: 2.10

A toolset that assist in the design of hybridization probes.

Author: Erik Wright

Maintainer: Erik Wright <DECIPHER at cae.wisc.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("DECIPHER")

To cite this package in a publication, start R and enter:

    citation("DECIPHER")

Documentation

PDF R Script Finding Chimeric Sequences
PDF R Script Getting Started DECIPHERing
PDF   Reference Manual

Details

biocViews Clustering, DataImport, Genetics, Infrastructure, Microarray, QualityControl, Sequencing, Software, Visualization
Depends R (>= 2.13.0), Biostrings(>= 2.16), RSQLite (>= 0.9), IRanges, stats
Imports Biostrings, RSQLite, IRanges, stats
Suggests
System Requirements
License GPL-3
URL
Depends On Me
Imports Me
Suggests Me
Version 1.2.0
Since Bioconductor 2.9 (R-2.14)

Package Downloads

Package Source DECIPHER_1.2.0.tar.gz
Windows Binary DECIPHER_1.2.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary DECIPHER_1.2.0.tgz
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Fred Hutchinson Cancer Research Center