Bioconductor version: 2.10
Denoising Algorithm based on Relevance network Topology (DART) is an algorithm designed to evaluate the consistency of prior information molecular signatures (e.g in-vitro perturbation expression signatures) in independent molecular data (e.g gene expression data sets). If consistent, a pruning network strategy is then used to infer the activation status of the molecular signature in individual samples.
Author: Yan Jiao, Katherine Lawler, Andrew E Teschendorff
Maintainer: Katherine Lawler <katherine.lawler at kcl.ac.uk>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("DART")
To cite this package in a publication, start R and enter:
citation("DART")
R Script | DART Tutorial | |
Reference Manual | ||
Text | NEWS |
biocViews | Bioinformatics, DifferentialExpression, GeneExpression, GraphsAndNetworks, Pathways, Software |
Depends | R (>= 2.10.0), igraph0 |
Imports | |
Suggests | breastCancerVDX, breastCancerMAINZ, Biobase |
System Requirements | |
License | GPL-2 |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Version | 1.2.1 |
Since | Bioconductor 2.10 (R-2.15) |
Package Source | DART_1.2.1.tar.gz |
Windows Binary | DART_1.2.1.zip (32- & 64-bit) |
MacOS 10.5 (Leopard) binary | DART_1.2.1.tgz |
Package Downloads Report | Download Stats |
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