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CGHregions
Dimension Reduction for Array CGH Data with Minimal Information Loss.
Bioconductor version: 2.10
Dimension Reduction for Array CGH Data with Minimal Information Loss
Author: Sjoerd Vosse & Mark van de Wiel
Maintainer: Sjoerd Vosse <info at vossewebdevelopment.nl>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("CGHregions")
To cite this package in a publication, start R and enter:
citation("CGHregions")
Documentation
| R Script | CGHcall | |
| Reference Manual |
Details
| biocViews | Microarray,CopyNumberVariants,Visualization, Software |
| Depends | R (>= 2.0.0), methods, Biobase, CGHbase |
| Imports | |
| Suggests | |
| System Requirements | |
| License | GPL (http://www.gnu.org/copyleft/gpl.html) |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | ADaCGH2 |
| Version | 1.14.0 |
| Since | Bioconductor 2.3 (R-2.8) |
Package Downloads
| Package Source | CGHregions_1.14.0.tar.gz |
| Windows Binary | CGHregions_1.14.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | CGHregions_1.14.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
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