CAMERA
Collection of annotation related methods for mass spectrometry data
Bioconductor version: 2.10
Annotation of peaklists generated by xcms, rule based annotation of isotopes and adducts, EIC correlation based tagging of unknown adducts and fragments
Author: Carsten Kuhl, Ralf Tautenhahn, Steffen Neumann {ckuhl|sneumann}@ipb-halle.de, rtautenh@scripps.edu
Maintainer: Carsten Kuhl <ckuhl at ipb-halle.de>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("CAMERA")
To cite this package in a publication, start R and enter:
citation("CAMERA")
Documentation
| R Script | Molecule Identification with CAMERA | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | MassSpectrometry, Software |
| Depends | R (>= 2.1.0), methods, xcms(>= 1.13.5) |
| Imports | methods, xcms, RBGL, graph, graphics, grDevices, stats, utils, Hmisc, igraph |
| Suggests | faahKO, RUnit |
| System Requirements | |
| License | GPL (>= 2) |
| URL | http://msbi.ipb-halle.de/msbi/CAMERA/ |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Version | 1.12.0 |
| Since | Bioconductor 2.4 (R-2.9) |
Package Downloads
| Package Source | CAMERA_1.12.0.tar.gz |
| Windows Binary | CAMERA_1.12.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | CAMERA_1.12.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
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