estimateMode |
Estimation of the modes of the rows of a matrix |
extractBic |
Extraction of Biclusters |
extractPlot |
Plotting of Biclustering Results |
fabi |
Factor Analysis for Bicluster Acquisition: Laplace Prior (FABI) |
fabia |
Factor Analysis for Bicluster Acquisition: Laplace Prior (FABIA) |
fabiaDemo |
Demos for fabia |
fabiap |
Factor Analysis for Bicluster Acquisition: Post-Projection (FABIAP) |
fabias |
Factor Analysis for Bicluster Acquisition: Sparseness Projection (FABIAS) |
fabiasp |
Factor Analysis for Bicluster Acquisition: Sparseness Projection (FABIASP) |
fabiaVersion |
Display version info for package and for FABIA |
Factorization |
The Factorization Class |
Factorization-class |
The Factorization Class |
makeFabiaData |
Generation of Bicluster Data |
makeFabiaDataBlocks |
Generation of Bicluster Data with Bicluster Blocks |
makeFabiaDataBlocksPos |
Generation of Bicluster Data with Bicluster Blocks |
makeFabiaDataPos |
Generation of Bicluster Data |
matrixImagePlot |
Plotting of a Matrix |
mfsc |
Sparse Matrix Factorization for Bicluster Analysis (MFSC) |
nmfdiv |
Non-negative Matrix Factorization: Kullback-Leibler Divergence |
nmfeu |
Non-negative Matrix Factorization: Euclidean Distance |
nmfsc |
Non-negative Sparse Matrix Factorization |
plot |
Plot of a Matrix Factorization |
plot-method |
Plot of a Matrix Factorization |
plot-methods |
Plot of a Matrix Factorization |
plotBicluster |
Plotting of a bicluster |
projFunc |
Projection of a Vector to a Sparse Vector |
projFuncPos |
Projection of a Vector to a Non-negative Sparse Vector |
readSamplesSpfabia |
Factor Analysis for Bicluster Acquisition: Read Sparse Matrix Samples |
readSpfabiaResult |
Factor Analysis for Bicluster Acquisition: Read Results of SpFabia |
samplesPerFeature |
Factor Analysis for Bicluster Acquisition: Supplies samples per feature |
show |
Plot Statistics of a Matrix Factorization |
show-method |
Plot Statistics of a Matrix Factorization |
show-methods |
Plot Statistics of a Matrix Factorization |
showSelected |
Plot Selected Statistics of a Matrix Factorization |
showSelected-method |
Plot Selected Statistics of a Matrix Factorization |
showSelected-methods |
Plot Selected Statistics of a Matrix Factorization |
spfabia |
Factor Analysis for Bicluster Acquisition: SPARSE FABIA |
summary |
Summary of Matrix Factorization |
summary-method |
Summary of Matrix Factorization |
summary-methods |
Summary of Matrix Factorization |