influential: Identification and Classification of the Most Influential Nodes
Provides functions for the identification, classification, and
ranking of influential nodes and candidate features from network and omics
data. The package implements the Integrated Value of Influence (IVI) for
integrative network centrality analysis, the SIR-based Influence Ranking
(SIRIR) model for unsupervised influence ranking, and the Experimental
data-based Integrative Ranking (ExIR) model for prioritizing candidate
driver, biomarker, and mediator features from experimental omics data.
Functions are provided for network reconstruction from adjacency matrices
and data frames, topological analysis, centrality calculation, assessment
of associations between centrality measures, and conditional probability
analysis. ExIR supports bulk and single-cell omics data, including matrices,
sparse matrices, data frames, tibbles, and Seurat objects.
| Version: |
2.3.1 |
| Depends: |
R (≥ 4.0.0) |
| Imports: |
igraph, irlba, edgeR, cli, Matrix, SeuratObject, tibble, janitor, ranger, foreach, doParallel, ggplot2, Rcpp |
| LinkingTo: |
Rcpp |
| Suggests: |
Hmisc (≥ 4.3-0), mgcv (≥ 1.8-31), nortest (≥ 1.0-4), NNS (≥ 0.4.7.1), BiocManager, readr, shiny, shinythemes, shinyWidgets, shinyjs, shinycssloaders, colourpicker, magrittr, DT, knitr, rmarkdown |
| Published: |
2026-05-28 |
| DOI: |
10.32614/CRAN.package.influential |
| Author: |
Adrian Salavaty 
[aut, cre],
Mirana Ramialison [ths],
Peter D. Currie [ths] |
| Maintainer: |
Adrian Salavaty <abbas.salavaty at gmail.com> |
| BugReports: |
https://github.com/asalavaty/influential/issues |
| License: |
GPL-3 |
| URL: |
https://github.com/asalavaty/influential,
https://asalavaty.github.io/influential/ |
| NeedsCompilation: |
yes |
| Additional_repositories: |
https://bioconductor.org/packages/release/bioc |
| Language: |
en-US |
| Citation: |
influential citation info |
| Materials: |
README, NEWS |
| In views: |
NetworkAnalysis |
| CRAN checks: |
influential results |
Documentation:
Downloads:
Reverse dependencies:
Linking:
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