Last updated on 2026-05-28 23:53:40 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.0 | 5.41 | 457.04 | 462.45 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.0 | 3.45 | 317.40 | 320.85 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.0.0 | 8.00 | 592.04 | 600.04 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 1.0.0 | 8.00 | 680.92 | 688.92 | ERROR | |
| r-devel-windows-x86_64 | 1.0.0 | 10.00 | 392.00 | 402.00 | OK | |
| r-patched-linux-x86_64 | 1.0.0 | 5.40 | 440.29 | 445.69 | OK | |
| r-release-linux-x86_64 | 1.0.0 | 5.02 | 440.34 | 445.36 | OK | |
| r-release-macos-arm64 | 1.0.0 | 1.00 | 90.00 | 91.00 | OK | |
| r-release-macos-x86_64 | 1.0.0 | 4.00 | 512.00 | 516.00 | OK | |
| r-release-windows-x86_64 | 1.0.0 | 7.00 | 388.00 | 395.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.0 | 1.00 | 85.00 | 86.00 | OK | |
| r-oldrel-macos-x86_64 | 1.0.0 | 4.00 | 396.00 | 400.00 | OK | |
| r-oldrel-windows-x86_64 | 1.0.0 | 9.00 | 538.00 | 547.00 | OK |
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [193s/210s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard testthat setup
> library(testthat)
> library(sumExtras)
>
> test_check("sumExtras")
Saving _problems/test-extras-173.R
Saving _problems/test-labels-196.R
Saving _problems/test-labels-224.R
[ FAIL 3 | WARN 2 | SKIP 0 | PASS 236 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-extras.R:168:3'): extras() works with tbl_svysummary ───────────
Error in `gtsummary::tbl_svysummary(svy_design, by = trt, include = c(age, grade))`: The following columns are not present: "warning" and "error".
Backtrace:
▆
1. ├─sumExtras::extras(...) at test-extras.R:168:3
2. └─gtsummary::tbl_svysummary(svy_design, by = trt, include = c(age, grade))
3. ├─cards::replace_null_statistic(...)
4. │ └─cards:::check_class(x, "card")
5. ├─cards::bind_ard(...)
6. │ └─dplyr::bind_rows(...)
7. │ └─rlang::list2(...)
8. ├─cardx::ard_total_n(data)
9. └─cardx:::ard_total_n.survey.design(data)
10. ├─dplyr::select(...)
11. ├─dplyr::mutate(...)
12. ├─cards::ard_tabulate_value(...)
13. └─cardx:::ard_tabulate_value.survey.design(...)
14. ├─dplyr::mutate(...)
15. ├─dplyr::filter(...)
16. ├─cards::ard_tabulate(...)
17. └─cardx:::ard_tabulate.survey.design(...)
18. ├─cards::tidy_ard_row_order(...)
19. │ └─dplyr::select(x, all_ard_groups(c("names", "levels")))
20. ├─cards::tidy_ard_column_order(...)
21. │ ├─dplyr::pull(...)
22. │ ├─dplyr::arrange(...)
23. │ ├─base::data.frame(colname = names(dplyr::select(x, all_ard_groups())))
24. │ └─dplyr::select(x, all_ard_groups())
25. ├─cards::as_card(...)
26. │ └─cards:::check_class(x, cls = "data.frame")
27. ├─dplyr::mutate(...)
28. └─cardx:::.restore_original_column_types(cards, data = data$variables)
29. └─cards::as_card(...)
30. └─cards::check_ard_structure(...)
31. └─cards:::.message_or_error(...)
32. └─cli::cli_abort(msg, call = call, .envir = envir)
33. └─rlang::abort(...)
── Error ('test-labels.R:194:3'): add_auto_labels() works with tbl_svysummary ──
Error in `gtsummary::tbl_svysummary(svy_trial, include = age)`: The following columns are not present: "warning" and "error".
Backtrace:
▆
1. ├─sumExtras::add_auto_labels(...) at test-labels.R:194:3
2. └─gtsummary::tbl_svysummary(svy_trial, include = age)
3. ├─cards::replace_null_statistic(...)
4. │ └─cards:::check_class(x, "card")
5. ├─cards::bind_ard(...)
6. │ └─dplyr::bind_rows(...)
7. │ └─rlang::list2(...)
8. ├─cardx::ard_total_n(data)
9. └─cardx:::ard_total_n.survey.design(data)
10. ├─dplyr::select(...)
11. ├─dplyr::mutate(...)
12. ├─cards::ard_tabulate_value(...)
13. └─cardx:::ard_tabulate_value.survey.design(...)
14. ├─dplyr::mutate(...)
15. ├─dplyr::filter(...)
16. ├─cards::ard_tabulate(...)
17. └─cardx:::ard_tabulate.survey.design(...)
18. ├─cards::tidy_ard_row_order(...)
19. │ └─dplyr::select(x, all_ard_groups(c("names", "levels")))
20. ├─cards::tidy_ard_column_order(...)
21. │ ├─dplyr::pull(...)
22. │ ├─dplyr::arrange(...)
23. │ ├─base::data.frame(colname = names(dplyr::select(x, all_ard_groups())))
24. │ └─dplyr::select(x, all_ard_groups())
25. ├─cards::as_card(...)
26. │ └─cards:::check_class(x, cls = "data.frame")
27. ├─dplyr::mutate(...)
28. └─cardx:::.restore_original_column_types(cards, data = data$variables)
29. └─cards::as_card(...)
30. └─cards::check_ard_structure(...)
31. └─cards:::.message_or_error(...)
32. └─cli::cli_abort(msg, call = call, .envir = envir)
33. └─rlang::abort(...)
── Error ('test-labels.R:219:3'): add_auto_labels() preserves manual labels from tbl_svysummary ──
Error in `gtsummary::tbl_svysummary(svy_trial, include = age, label = list(age ~ "Manual Override"))`: The following columns are not present: "warning" and "error".
Backtrace:
▆
1. ├─sumExtras::add_auto_labels(...) at test-labels.R:219:3
2. └─gtsummary::tbl_svysummary(svy_trial, include = age, label = list(age ~ "Manual Override"))
3. ├─cards::replace_null_statistic(...)
4. │ └─cards:::check_class(x, "card")
5. ├─cards::bind_ard(...)
6. │ └─dplyr::bind_rows(...)
7. │ └─rlang::list2(...)
8. ├─cardx::ard_total_n(data)
9. └─cardx:::ard_total_n.survey.design(data)
10. ├─dplyr::select(...)
11. ├─dplyr::mutate(...)
12. ├─cards::ard_tabulate_value(...)
13. └─cardx:::ard_tabulate_value.survey.design(...)
14. ├─dplyr::mutate(...)
15. ├─dplyr::filter(...)
16. ├─cards::ard_tabulate(...)
17. └─cardx:::ard_tabulate.survey.design(...)
18. ├─cards::tidy_ard_row_order(...)
19. │ └─dplyr::select(x, all_ard_groups(c("names", "levels")))
20. ├─cards::tidy_ard_column_order(...)
21. │ ├─dplyr::pull(...)
22. │ ├─dplyr::arrange(...)
23. │ ├─base::data.frame(colname = names(dplyr::select(x, all_ard_groups())))
24. │ └─dplyr::select(x, all_ard_groups())
25. ├─cards::as_card(...)
26. │ └─cards:::check_class(x, cls = "data.frame")
27. ├─dplyr::mutate(...)
28. └─cardx:::.restore_original_column_types(cards, data = data$variables)
29. └─cards::as_card(...)
30. └─cards::check_ard_structure(...)
31. └─cards:::.message_or_error(...)
32. └─cli::cli_abort(msg, call = call, .envir = envir)
33. └─rlang::abort(...)
[ FAIL 3 | WARN 2 | SKIP 0 | PASS 236 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [408s/481s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard testthat setup
> library(testthat)
> library(sumExtras)
>
> test_check("sumExtras")
Saving _problems/test-extras-173.R
Saving _problems/test-labels-196.R
Saving _problems/test-labels-224.R
[ FAIL 3 | WARN 2 | SKIP 0 | PASS 236 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-extras.R:168:3'): extras() works with tbl_svysummary ───────────
Error in `gtsummary::tbl_svysummary(svy_design, by = trt, include = c(age, grade))`: The following columns are not present: "warning" and "error".
Backtrace:
▆
1. ├─sumExtras::extras(...) at test-extras.R:168:3
2. └─gtsummary::tbl_svysummary(svy_design, by = trt, include = c(age, grade))
3. ├─cards::replace_null_statistic(...)
4. │ └─cards:::check_class(x, "card")
5. ├─cards::bind_ard(...)
6. │ └─dplyr::bind_rows(...)
7. │ └─rlang::list2(...)
8. ├─cardx::ard_total_n(data)
9. └─cardx:::ard_total_n.survey.design(data)
10. ├─dplyr::select(...)
11. ├─dplyr::mutate(...)
12. ├─cards::ard_tabulate_value(...)
13. └─cardx:::ard_tabulate_value.survey.design(...)
14. ├─dplyr::mutate(...)
15. ├─dplyr::filter(...)
16. ├─cards::ard_tabulate(...)
17. └─cardx:::ard_tabulate.survey.design(...)
18. ├─cards::tidy_ard_row_order(...)
19. │ └─dplyr::select(x, all_ard_groups(c("names", "levels")))
20. ├─cards::tidy_ard_column_order(...)
21. │ ├─dplyr::pull(...)
22. │ ├─dplyr::arrange(...)
23. │ ├─base::data.frame(colname = names(dplyr::select(x, all_ard_groups())))
24. │ └─dplyr::select(x, all_ard_groups())
25. ├─cards::as_card(...)
26. │ └─cards:::check_class(x, cls = "data.frame")
27. ├─dplyr::mutate(...)
28. └─cardx:::.restore_original_column_types(cards, data = data$variables)
29. └─cards::as_card(...)
30. └─cards::check_ard_structure(...)
31. └─cards:::.message_or_error(...)
32. └─cli::cli_abort(msg, call = call, .envir = envir)
33. └─rlang::abort(...)
── Error ('test-labels.R:194:3'): add_auto_labels() works with tbl_svysummary ──
Error in `gtsummary::tbl_svysummary(svy_trial, include = age)`: The following columns are not present: "warning" and "error".
Backtrace:
▆
1. ├─sumExtras::add_auto_labels(...) at test-labels.R:194:3
2. └─gtsummary::tbl_svysummary(svy_trial, include = age)
3. ├─cards::replace_null_statistic(...)
4. │ └─cards:::check_class(x, "card")
5. ├─cards::bind_ard(...)
6. │ └─dplyr::bind_rows(...)
7. │ └─rlang::list2(...)
8. ├─cardx::ard_total_n(data)
9. └─cardx:::ard_total_n.survey.design(data)
10. ├─dplyr::select(...)
11. ├─dplyr::mutate(...)
12. ├─cards::ard_tabulate_value(...)
13. └─cardx:::ard_tabulate_value.survey.design(...)
14. ├─dplyr::mutate(...)
15. ├─dplyr::filter(...)
16. ├─cards::ard_tabulate(...)
17. └─cardx:::ard_tabulate.survey.design(...)
18. ├─cards::tidy_ard_row_order(...)
19. │ └─dplyr::select(x, all_ard_groups(c("names", "levels")))
20. ├─cards::tidy_ard_column_order(...)
21. │ ├─dplyr::pull(...)
22. │ ├─dplyr::arrange(...)
23. │ ├─base::data.frame(colname = names(dplyr::select(x, all_ard_groups())))
24. │ └─dplyr::select(x, all_ard_groups())
25. ├─cards::as_card(...)
26. │ └─cards:::check_class(x, cls = "data.frame")
27. ├─dplyr::mutate(...)
28. └─cardx:::.restore_original_column_types(cards, data = data$variables)
29. └─cards::as_card(...)
30. └─cards::check_ard_structure(...)
31. └─cards:::.message_or_error(...)
32. └─cli::cli_abort(msg, call = call, .envir = envir)
33. └─rlang::abort(...)
── Error ('test-labels.R:219:3'): add_auto_labels() preserves manual labels from tbl_svysummary ──
Error in `gtsummary::tbl_svysummary(svy_trial, include = age, label = list(age ~ "Manual Override"))`: The following columns are not present: "warning" and "error".
Backtrace:
▆
1. ├─sumExtras::add_auto_labels(...) at test-labels.R:219:3
2. └─gtsummary::tbl_svysummary(svy_trial, include = age, label = list(age ~ "Manual Override"))
3. ├─cards::replace_null_statistic(...)
4. │ └─cards:::check_class(x, "card")
5. ├─cards::bind_ard(...)
6. │ └─dplyr::bind_rows(...)
7. │ └─rlang::list2(...)
8. ├─cardx::ard_total_n(data)
9. └─cardx:::ard_total_n.survey.design(data)
10. ├─dplyr::select(...)
11. ├─dplyr::mutate(...)
12. ├─cards::ard_tabulate_value(...)
13. └─cardx:::ard_tabulate_value.survey.design(...)
14. ├─dplyr::mutate(...)
15. ├─dplyr::filter(...)
16. ├─cards::ard_tabulate(...)
17. └─cardx:::ard_tabulate.survey.design(...)
18. ├─cards::tidy_ard_row_order(...)
19. │ └─dplyr::select(x, all_ard_groups(c("names", "levels")))
20. ├─cards::tidy_ard_column_order(...)
21. │ ├─dplyr::pull(...)
22. │ ├─dplyr::arrange(...)
23. │ ├─base::data.frame(colname = names(dplyr::select(x, all_ard_groups())))
24. │ └─dplyr::select(x, all_ard_groups())
25. ├─cards::as_card(...)
26. │ └─cards:::check_class(x, cls = "data.frame")
27. ├─dplyr::mutate(...)
28. └─cardx:::.restore_original_column_types(cards, data = data$variables)
29. └─cards::as_card(...)
30. └─cards::check_ard_structure(...)
31. └─cards:::.message_or_error(...)
32. └─cli::cli_abort(msg, call = call, .envir = envir)
33. └─rlang::abort(...)
[ FAIL 3 | WARN 2 | SKIP 0 | PASS 236 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [415s/531s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard testthat setup
> library(testthat)
> library(sumExtras)
>
> test_check("sumExtras")
Saving _problems/test-extras-173.R
Saving _problems/test-labels-196.R
Saving _problems/test-labels-224.R
[ FAIL 3 | WARN 2 | SKIP 0 | PASS 236 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-extras.R:168:3'): extras() works with tbl_svysummary ───────────
Error in `gtsummary::tbl_svysummary(svy_design, by = trt, include = c(age, grade))`: The following columns are not present: "warning" and "error".
Backtrace:
▆
1. ├─sumExtras::extras(...) at test-extras.R:168:3
2. └─gtsummary::tbl_svysummary(svy_design, by = trt, include = c(age, grade))
3. ├─cards::replace_null_statistic(...)
4. │ └─cards:::check_class(x, "card")
5. ├─cards::bind_ard(...)
6. │ └─dplyr::bind_rows(...)
7. │ └─rlang::list2(...)
8. ├─cardx::ard_total_n(data)
9. └─cardx:::ard_total_n.survey.design(data)
10. ├─dplyr::select(...)
11. ├─dplyr::mutate(...)
12. ├─cards::ard_tabulate_value(...)
13. └─cardx:::ard_tabulate_value.survey.design(...)
14. ├─dplyr::mutate(...)
15. ├─dplyr::filter(...)
16. ├─cards::ard_tabulate(...)
17. └─cardx:::ard_tabulate.survey.design(...)
18. ├─cards::tidy_ard_row_order(...)
19. │ └─dplyr::select(x, all_ard_groups(c("names", "levels")))
20. ├─cards::tidy_ard_column_order(...)
21. │ ├─dplyr::pull(...)
22. │ ├─dplyr::arrange(...)
23. │ ├─base::data.frame(colname = names(dplyr::select(x, all_ard_groups())))
24. │ └─dplyr::select(x, all_ard_groups())
25. ├─cards::as_card(...)
26. │ └─cards:::check_class(x, cls = "data.frame")
27. ├─dplyr::mutate(...)
28. └─cardx:::.restore_original_column_types(cards, data = data$variables)
29. └─cards::as_card(...)
30. └─cards::check_ard_structure(...)
31. └─cards:::.message_or_error(...)
32. └─cli::cli_abort(msg, call = call, .envir = envir)
33. └─rlang::abort(...)
── Error ('test-labels.R:194:3'): add_auto_labels() works with tbl_svysummary ──
Error in `gtsummary::tbl_svysummary(svy_trial, include = age)`: The following columns are not present: "warning" and "error".
Backtrace:
▆
1. ├─sumExtras::add_auto_labels(...) at test-labels.R:194:3
2. └─gtsummary::tbl_svysummary(svy_trial, include = age)
3. ├─cards::replace_null_statistic(...)
4. │ └─cards:::check_class(x, "card")
5. ├─cards::bind_ard(...)
6. │ └─dplyr::bind_rows(...)
7. │ └─rlang::list2(...)
8. ├─cardx::ard_total_n(data)
9. └─cardx:::ard_total_n.survey.design(data)
10. ├─dplyr::select(...)
11. ├─dplyr::mutate(...)
12. ├─cards::ard_tabulate_value(...)
13. └─cardx:::ard_tabulate_value.survey.design(...)
14. ├─dplyr::mutate(...)
15. ├─dplyr::filter(...)
16. ├─cards::ard_tabulate(...)
17. └─cardx:::ard_tabulate.survey.design(...)
18. ├─cards::tidy_ard_row_order(...)
19. │ └─dplyr::select(x, all_ard_groups(c("names", "levels")))
20. ├─cards::tidy_ard_column_order(...)
21. │ ├─dplyr::pull(...)
22. │ ├─dplyr::arrange(...)
23. │ ├─base::data.frame(colname = names(dplyr::select(x, all_ard_groups())))
24. │ └─dplyr::select(x, all_ard_groups())
25. ├─cards::as_card(...)
26. │ └─cards:::check_class(x, cls = "data.frame")
27. ├─dplyr::mutate(...)
28. └─cardx:::.restore_original_column_types(cards, data = data$variables)
29. └─cards::as_card(...)
30. └─cards::check_ard_structure(...)
31. └─cards:::.message_or_error(...)
32. └─cli::cli_abort(msg, call = call, .envir = envir)
33. └─rlang::abort(...)
── Error ('test-labels.R:219:3'): add_auto_labels() preserves manual labels from tbl_svysummary ──
Error in `gtsummary::tbl_svysummary(svy_trial, include = age, label = list(age ~ "Manual Override"))`: The following columns are not present: "warning" and "error".
Backtrace:
▆
1. ├─sumExtras::add_auto_labels(...) at test-labels.R:219:3
2. └─gtsummary::tbl_svysummary(svy_trial, include = age, label = list(age ~ "Manual Override"))
3. ├─cards::replace_null_statistic(...)
4. │ └─cards:::check_class(x, "card")
5. ├─cards::bind_ard(...)
6. │ └─dplyr::bind_rows(...)
7. │ └─rlang::list2(...)
8. ├─cardx::ard_total_n(data)
9. └─cardx:::ard_total_n.survey.design(data)
10. ├─dplyr::select(...)
11. ├─dplyr::mutate(...)
12. ├─cards::ard_tabulate_value(...)
13. └─cardx:::ard_tabulate_value.survey.design(...)
14. ├─dplyr::mutate(...)
15. ├─dplyr::filter(...)
16. ├─cards::ard_tabulate(...)
17. └─cardx:::ard_tabulate.survey.design(...)
18. ├─cards::tidy_ard_row_order(...)
19. │ └─dplyr::select(x, all_ard_groups(c("names", "levels")))
20. ├─cards::tidy_ard_column_order(...)
21. │ ├─dplyr::pull(...)
22. │ ├─dplyr::arrange(...)
23. │ ├─base::data.frame(colname = names(dplyr::select(x, all_ard_groups())))
24. │ └─dplyr::select(x, all_ard_groups())
25. ├─cards::as_card(...)
26. │ └─cards:::check_class(x, cls = "data.frame")
27. ├─dplyr::mutate(...)
28. └─cardx:::.restore_original_column_types(cards, data = data$variables)
29. └─cards::as_card(...)
30. └─cards::check_ard_structure(...)
31. └─cards:::.message_or_error(...)
32. └─cli::cli_abort(msg, call = call, .envir = envir)
33. └─rlang::abort(...)
[ FAIL 3 | WARN 2 | SKIP 0 | PASS 236 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc