Entry: samr
Aliases: samr
Keywords: univar survival ts nonparametric
Description: Significance analysis of microarrays
URL: ../../../library/samr/html/samr.html

Entry: samr.compute.delta.table
Aliases: samr.compute.delta.table
Keywords: univar survival ts nonparametric
Description: Compute delta table for SAM analysis
URL: ../../../library/samr/html/samr.compute.delta.table.html

Entry: samr.compute.siggenes.table
Aliases: samr.compute.siggenes.table
Keywords: univar survival ts nonparametric
Description: Compute significant genes table
URL: ../../../library/samr/html/samr.compute.siggenes.table.html

Entry: samr-internal
Aliases: ttest.func wilcoxon.func onesample.ttest.func paired.ttest.func cox.func multiclass.func quantitative.func patterndiscovery.func timearea.func sumlengths detec.slab detec.horiz localfdr predictlocalfdr qvalue.func foldchange.twoclass foldchange.paired est.s0 coxscor coxvar coxstuff permute permute.rows insert.value integer.base.b varr mysvd getperms compute.block.perms parse.block.labels.for.2classes parse.time.labels.and.summarize.data check.format samr.const.quantitative.response samr.const.twoclass.unpaired.response samr.const.survival.response samr.const.multiclass.response samr.const.oneclass.response samr.const.twoclass.paired.response samr.const.twoclass.unpaired.timecourse.response samr.const.twoclass.paired.timecourse.response samr.const.oneclass.timecourse.response samr.const.patterndiscovery.response samr.xl.const.response.types.table samr.xl.build.data samr.xl.compute.plot.xy samr.xl.parse.survival samr.xl.parse.patterndiscovery samr.xl.error.trace
Keywords: internal
Description: Internal samr functions
URL: ../../../library/samr/html/samr.internal.html

Entry: samr.missrate
Aliases: samr.missrate
Keywords: univar survival ts nonparametric
Description: Estimate the miss rate table for a SAM analysis
URL: ../../../library/samr/html/samr.missrate.html

Entry: samr.plot
Aliases: samr.plot
Keywords: univar survival ts nonparametric
Description: Make Q-Q plot for SAM analysis
URL: ../../../library/samr/html/samr.plot.html
