getSequence              package:seqinr              R Documentation

_G_e_n_e_r_i_c _F_u_n_c_t_i_o_n _T_o _G_e_t _a _s_e_q_u_e_n_c_e

_D_e_s_c_r_i_p_t_i_o_n:

     Method for the classes of sequences:  'SeqFastadna', 
     'SeqFastaAA',  'SeqAcnucWeb' and 'SeqFrag'.

_U_s_a_g_e:

     getSequence(object)

_A_r_g_u_m_e_n_t_s:

  object: an object of class 'SeqFastadna',  'SeqFastaAA', 
          'SeqAcnucWeb' or 'SeqFrag'.

_V_a_l_u_e:

     A vector of chars containing the sequence

_A_u_t_h_o_r(_s):

     D. Charif

_R_e_f_e_r_e_n_c_e_s:

      To have an overview of the seqinR's functionnality, please
     consult this vignette:  Charif, D., Lobry, J.R. (2005) SeqinR: a
     contributed package to the R project for statistical computing
     devoted to biological sequences retrieval and analysis. Springer
     Verlag, _Biological and Medical Physics/Biomedical Series_, in
     preparation. 

_S_e_e _A_l_s_o:

     'getFrag', 'c2s'

_E_x_a_m_p_l_e_s:

      methods(getSequence)

