plotbackground          package:phyloarray          R Documentation

_P_l_o_t _b_a_c_k_g_r_o_u_n_d

_D_e_s_c_r_i_p_t_i_o_n:

     Make a plot of the background of a certain color and scan.

_U_s_a_g_e:

       plotbackground(datalist, dye="R", scan=1)

_A_r_g_u_m_e_n_t_s:

datalist: An object of type 'phyloarray'

     dye: The dye of which the background should be plotted, i.e. "R"
          or "G".

    scan: The scan of which the background should be plotted. This may
          be a number (the number of the column) or a string (name of
          the column).

_V_a_l_u_e:

_N_o_t_e:

_A_u_t_h_o_r(_s):

     Kurt Sys (kurt.sys@advalvas.be)

_R_e_f_e_r_e_n_c_e_s:

_S_e_e _A_l_s_o:

     'Scandataraw' 'Phylodata'

     'calcbackground'

     'filled.contour'

_E_x_a_m_p_l_e_s:

       # load data this-is-escaped-codenormal-bracket29bracket-normal, i.e. this-is-escaped-codenormal-bracket30bracket-normal
       data(Phylodata)

       # plot background for red, temperature=58C
       plotbackground(scans, dye="R", scan="58")

       # this is the same
       plotbackground(scans, scan="58")

       # and this too
       plotbackground(scans, scan=3)

