mitoODEdata

DOI: 10.18129/B9.bioc.mitoODEdata    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see mitoODEdata.

Experimental data associated to the paper "Dynamical modelling of phenotypes in a genome-wide RNAi live-cell imaging assay" (submitted).

Bioconductor version: 3.9

This package contains the experimental data (assay annotation, siRNA annotation, time-lapse cell counts) associated to the paper "Dynamical modelling of phenotypes in a genome-wide RNAi live-cell imaging assay" (submitted). The data ultimately come from the Mitocheck assay reported in "Phenotypic profiling of the human genome by time-lapse microscopy reveals cell division genes" (Neumann, Walter et al, Nature 2010).

Author: Gregoire Pau

Maintainer: Gregoire Pau <pau.gregoire at gene.com>

Citation (from within R, enter citation("mitoODEdata")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("mitoODEdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("mitoODEdata")

 

PDF R Script Mitoode data
PDF   Reference Manual
Text   NEWS

Details

biocViews ExperimentData, Genome
Version 1.20.0
License LGPL
Depends R (>= 2.14.0)
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me mitoODE
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package mitoODEdata_1.20.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/mitoODEdata
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/mitoODEdata
Package Short Url https://bioconductor.org/packages/mitoODEdata/
Package Downloads Report Download Stats

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