ChimpHumanBrainData

DOI: 10.18129/B9.bioc.ChimpHumanBrainData    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see ChimpHumanBrainData.

Chimp and human brain data package

Bioconductor version: 3.9

This data package contains chimp and human brain data extracted from the ArrayExpress accession E-AFMX-2. Both human and chimp RNAs were run on human hgu95av2 Affymetrix arrays. It is a useful dataset for tutorials.

Author: Roman Jaksik, Naomi Altman, and Sean Davis

Maintainer: Sean Davis <sdavis2 at mail.nih.gov>

Citation (from within R, enter citation("ChimpHumanBrainData")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ChimpHumanBrainData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ChimpHumanBrainData")

 

PDF R Script DiffExpressVignette.pdf
PDF   Reference Manual

Details

biocViews ExperimentData, GEO, Homo_sapiens_Data, MicroarrayData, Pan_troglodytes_Data, Tissue, TissueMicroarrayData
Version 1.22.0
License MIT
Depends affy, qvalue, limma, hexbin, statmod
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ChimpHumanBrainData_1.22.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/ChimpHumanBrainData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ChimpHumanBrainData
Package Short Url https://bioconductor.org/packages/ChimpHumanBrainData/
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