## ----style, echo = FALSE, results = 'asis'--------------------------------- BiocStyle::markdown(css.files = c("custom.css")) ## ----alphabet, echo=FALSE-------------------------------------------------- suppressPackageStartupMessages(library(Modstrings)) df <- as.data.frame(Modstrings:::additionalInfo(Modstrings:::MOD_DNA_STRING_CODEC)) df <- df[df$abbrev != "",] colnames(df) <- c("modification", "short name", "nomenclature", "orig. base", "abbreviation") knitr::kable( df, caption = 'List of supported DNA modifications by ModDNAString objects.' ) ## ----sessioninfo----------------------------------------------------------- sessionInfo()