MBCB

DOI: 10.18129/B9.bioc.MBCB    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see MBCB.

MBCB (Model-based Background Correction for Beadarray)

Bioconductor version: 3.9

This package provides a model-based background correction method, which incorporates the negative control beads to pre-process Illumina BeadArray data.

Author: Yang Xie <Yang.Xie at UTSouthwestern.edu>

Maintainer: Jeff Allen <Jeffrey.Allen at UTSouthwestern.edu>

Citation (from within R, enter citation("MBCB")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MBCB")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MBCB")

 

PDF R Script MBCB
PDF   Reference Manual

Details

biocViews Microarray, Preprocessing, Software
Version 1.38.0
In Bioconductor since BioC 2.7 (R-2.12) (9 years)
License GPL (>= 2)
Depends R (>= 2.9.0), tcltk, tcltk2
Imports preprocessCore, stats, utils
LinkingTo
Suggests
SystemRequirements
Enhances
URL http://www.utsouthwestern.edu
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MBCB_1.38.0.tar.gz
Windows Binary MBCB_1.38.0.zip
Mac OS X 10.11 (El Capitan) MBCB_1.38.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/MBCB
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MBCB
Package Short Url https://bioconductor.org/packages/MBCB/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: