occugene

DOI: 10.18129/B9.bioc.occugene    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see occugene.

Functions for Multinomial Occupancy Distribution

Bioconductor version: 3.8

Statistical tools for building random mutagenesis libraries for prokaryotes. The package has functions for handling the occupancy distribution for a multinomial and for estimating the number of essential genes in random transposon mutagenesis libraries.

Author: Oliver Will <oliverrreader at gmail.com>

Maintainer: Oliver Will <oliverrreader at gmail.com>

Citation (from within R, enter citation("occugene")):

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("occugene")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("occugene")

 

PDF R Script occugene
PDF   Reference Manual

Details

biocViews Annotation, Pathways, Software
Version 1.42.0
In Bioconductor since BioC 2.2 (R-2.7) (11 years)
License GPL (>= 2)
Depends R (>= 2.0.0)
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package occugene_1.42.0.tar.gz
Windows Binary occugene_1.42.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) occugene_1.42.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/occugene
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/occugene
Package Short Url http://bioconductor.org/packages/occugene/
Package Downloads Report Download Stats

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