miRNAmeConverter

DOI: 10.18129/B9.bioc.miRNAmeConverter    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see miRNAmeConverter.

Convert miRNA Names to Different miRBase Versions

Bioconductor version: 3.8

Translating mature miRNA names to different miRBase versions, sequence retrieval, checking names for validity and detecting miRBase version of a given set of names (data from http://www.mirbase.org/).

Author: Stefan Haunsberger [aut, cre]

Maintainer: Stefan J. Haunsberger <stefan.haunsberger at gmail.com>

Citation (from within R, enter citation("miRNAmeConverter")):

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("miRNAmeConverter")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF   Reference Manual
Text   NEWS

Details

biocViews Preprocessing, Software, miRNA
Version 1.10.0
In Bioconductor since BioC 3.3 (R-3.3) (3 years)
License Artistic-2.0
Depends miRBaseVersions.db
Imports DBI, AnnotationDbi, reshape2
LinkingTo
Suggests methods, testthat, knitr, rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package miRNAmeConverter_1.10.0.tar.gz
Windows Binary miRNAmeConverter_1.10.0.zip
Mac OS X 10.11 (El Capitan) miRNAmeConverter_1.10.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/miRNAmeConverter
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/miRNAmeConverter
Package Short Url http://bioconductor.org/packages/miRNAmeConverter/
Package Downloads Report Download Stats

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