Rdisop

DOI: 10.18129/B9.bioc.Rdisop    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see Rdisop.

Decomposition of Isotopic Patterns

Bioconductor version: 3.8

Identification of metabolites using high precision mass spectrometry. MS Peaks are used to derive a ranked list of sum formulae, alternatively for a given sum formula the theoretical isotope distribution can be calculated to search in MS peak lists.

Author: Anton Pervukhin <apervukh at minet.uni-jena.de>, Steffen Neumann <sneumann at ipb-halle.de>

Maintainer: Steffen Neumann <sneumann at ipb-halle.de>

Citation (from within R, enter citation("Rdisop")):

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("Rdisop")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rdisop")

 

PDF Molecule Identification with Rdisop
PDF   Reference Manual
Text   INSTALL

Details

biocViews ImmunoOncology, MassSpectrometry, Metabolomics, Software
Version 1.42.1
In Bioconductor since BioC 2.2 (R-2.7) (11 years)
License GPL-2
Depends R (>= 2.0.0), RcppClassic
Imports
LinkingTo RcppClassic, Rcpp
Suggests RUnit
SystemRequirements None
Enhances
URL https://github.com/sneumann/Rdisop
BugReports https://github.com/sneumann/Rdisop/issues/new
Depends On Me
Imports Me
Suggests Me MSnbase, RforProteomics
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Rdisop_1.42.1.tar.gz
Windows Binary Rdisop_1.42.1.zip
Mac OS X 10.11 (El Capitan) Rdisop_1.42.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/Rdisop
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Rdisop
Package Short Url http://bioconductor.org/packages/Rdisop/
Package Downloads Report Download Stats

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