Mfuzz

DOI: 10.18129/B9.bioc.Mfuzz    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see Mfuzz.

Soft clustering of time series gene expression data

Bioconductor version: 3.8

Package for noise-robust soft clustering of gene expression time-series data (including a graphical user interface)

Author: Matthias Futschik <matthias.futschik at sysbiolab.eu>

Maintainer: Matthias Futschik <matthias.futschik at sysbiolab.eu>

Citation (from within R, enter citation("Mfuzz")):

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("Mfuzz")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Mfuzz")

 

PDF R Script Introduction to Mfuzz
PDF   Reference Manual

Details

biocViews Clustering, Microarray, Preprocessing, Software, TimeCourse, Visualization
Version 2.42.0
In Bioconductor since BioC 1.8 (R-2.3) (13 years)
License GPL-2
Depends R (>= 2.5.0), Biobase(>= 2.5.5), e1071
Imports tcltk, tkWidgets
LinkingTo
Suggests marray
SystemRequirements
Enhances
URL http://mfuzz.sysbiolab.eu/
Depends On Me cycle
Imports Me
Suggests Me pwOmics
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Mfuzz_2.42.0.tar.gz
Windows Binary Mfuzz_2.42.0.zip
Mac OS X 10.11 (El Capitan) Mfuzz_2.42.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/Mfuzz
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Mfuzz
Package Short Url http://bioconductor.org/packages/Mfuzz/
Package Downloads Report Download Stats

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