CHANGES IN VERSION 1.3 ------------------------- o Bioconductor Release (3.3) Version NEW FEATURES o Fragment Length Filter: Filtering of paired end read pairs by TLEN field with a minimum and maximum TLEN o SAMFLAG Filtering: Filter out reads with a certain SAMFLAG set, e.g. 1024 for marked optical duplicates BUG FIXES o Path extension for relative paths, e.g. resolve "~" to /home/$USER in UNIX CHANGES IN VERSION 1.2 ------------------------- o Bioconductor Release (3.2) Version CHANGES IN VERSION 1.0 ------------------------- o Bioconductor Release (3.1) Version CHANGES IN VERSION 0.99.0 ------------------------- o Inital Bioconductor Submission