intansv

DOI: 10.18129/B9.bioc.intansv    

Integrative analysis of structural variations

Bioconductor version: Release (3.6)

This package provides efficient tools to read and integrate structural variations predicted by popular softwares. Annotation and visulation of structural variations are also implemented in the package.

Author: Wen Yao <ywhzau at gmail.com>

Maintainer: Wen Yao <ywhzau at gmail.com>

Citation (from within R, enter citation("intansv")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("intansv")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("intansv")

 

PDF R Script An Introduction to intansv
PDF   Reference Manual
Text   NEWS

Details

biocViews Annotation, Genetics, Sequencing, Software
Version 1.18.0
In Bioconductor since BioC 2.13 (R-3.0) (4.5 years)
License Artistic-2.0
Depends R (>= 2.14.0), plyr, ggbio, GenomicRanges
Imports BiocGenerics, IRanges
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package intansv_1.18.0.tar.gz
Windows Binary intansv_1.18.0.zip
Mac OS X 10.11 (El Capitan) intansv_1.18.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/intansv
Package Short Url http://bioconductor.org/packages/intansv/
Package Downloads Report Download Stats

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