DOI: 10.18129/B9.bioc.gtrellis    

Genome Level Trellis Layout

Bioconductor version: Release (3.6)

Genome level Trellis graph visualizes genomic data conditioned by genomic categories (e.g. chromosomes). For each genomic category, multiple dimensional data which are represented as tracks describe different features from different aspects. This package provides high flexibility to arrange genomic categories and to add self-defined graphics in the plot.

Author: Zuguang Gu

Maintainer: Zuguang Gu < at>

Citation (from within R, enter citation("gtrellis")):


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biocViews Sequencing, Software, Visualization
Version 1.11.1
In Bioconductor since BioC 3.1 (R-3.2) (3 years)
License GPL (>= 2)
Depends R (>= 3.1.2), grid, IRanges, GenomicRanges
Imports circlize (>= 0.3.3), GetoptLong, grDevices, utils
Suggests testthat (>= 1.0.0), knitr, RColorBrewer, markdown, ComplexHeatmap(>= 1.9.7), Cairo, png, jpeg, tiff
Depends On Me
Imports Me YAPSA
Suggests Me
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Source Package gtrellis_1.11.1.tar.gz
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