plotSignatures {maftools} | R Documentation |
Takes results from extractSignatures
and plots decomposed mutational signatures as a barplot.
plotSignatures(nmfRes = NULL, contributions = FALSE, color = NULL, patient_order = NULL, font_size = 1.2, axis_lwd = 2, title_size = 0.9, ...)
nmfRes |
results from |
contributions |
If TRUE plots contribution of signatures in each sample. |
color |
colors for each Ti/Tv conversion class. Default NULL |
patient_order |
User defined ordering of samples. Default NULL. |
font_size |
font size. Default 1.2 |
axis_lwd |
axis width. Default 2. |
title_size |
size of title. Default 1.3 |
... |
further plot options passed to |
ggplot object if contributions is TRUE
trinucleotideMatrix
plotSignatures