keggConv {KEGGREST} | R Documentation |
Convert KEGG identifiers to/from outside identifiers.
keggConv(target, source)
target |
A KEGG organism code (), T number, or one of the external
databases |
source |
Same as |
A named character vector.
Dan Tenenbaum
http://www.kegg.jp/kegg/docs/keggapi.html
head(keggConv("eco", "ncbi-geneid")) ## conversion from NCBI GeneID to ## KEGG ID for E. coli genes head(keggConv("ncbi-geneid", "eco")) ## opposite direction head(keggConv("ncbi-proteinid", c("hsa:10458", "ece:Z5100"))) ## conversion from KEGG ID ## to NCBI GI ## conversion from NCBI GI to KEGG ID when the organism code is not known: head(keggConv("genes", "ncbi-geneid:3113320"))