wrapperCalibrationPlot {DAPAR}R Documentation

Performs a calibration plot on an MSnSet object, calling the cp4p package functions.

Description

This function is a wrapper to the calibration.plot method of the cp4p package for use with MSnSet objects.

Usage

wrapperCalibrationPlot(vPVal, pi0Method = "pounds")

Arguments

vPVal

A dataframe that contains quantitative data.

pi0Method

A vector of the conditions (labels) (one label per sample).

Value

A plot

Author(s)

Samuel Wieczorek

Examples

require(DAPARdata)
data(Exp1_R25_pept)
condition1 <- '25fmol'
condition2 <- '10fmol'
qData <- Biobase::exprs(Exp1_R25_pept[1:1000])
labels <- Biobase::pData(Exp1_R25_pept[1:1000])[,"Label"]
diffAnaWelch(qData, labels, condition1, condition2)

[Package DAPAR version 1.10.4 Index]