diffAnaGetSignificant {DAPAR}R Documentation

Returns a MSnSet object with only proteins significant after differential analysis.

Description

Returns a MSnSet object with only proteins significant after differential analysis.

Usage

diffAnaGetSignificant(obj)

Arguments

obj

An object of class MSnSet.

Value

A MSnSet

Author(s)

Alexia Dorffer

Examples

require(DAPARdata)
data(Exp1_R25_pept)
condition1 <- "25fmol"
condition2 <- "10fmol"
resLimma <- wrapper.diffAnaLimma(Exp1_R25_pept[1:1000], 
condition1, condition2)
obj <-diffAnaSave(Exp1_R25_pept[1:1000], resLimma, "limma", 
condition1, condition2)
signif <- diffAnaGetSignificant(obj)

[Package DAPAR version 1.10.4 Index]