CHANGES IN VERSION 1.1.4 ------------------------ BUG FIXES o Fixed a mistake in the calculation of differential scores from version 1.1.2 CHANGES IN VERSION 1.1.2 ------------------------ NEW FEATURES o Proper print() methods for all objects. BUG FIXES o Fixed a bug where chromosomes with a single bin were making problems. CHANGES IN VERSION 1.1.1 ------------------------ NEW FEATURES o Selection of peaks can be done with 'changeFDR'. o Peak calls are available in each chromstaR-object as list entry '$peaks'. SIGNIFICANT USER-LEVEL CHANGES o 'plotFoldEnrichment' renamed to 'plotEnrichment'. o 'exportBinnedData', 'exportUnivariates', 'exportMultivariates', 'exportCombinedMultivariates' replaced by 'exportCounts', 'exportPeaks', 'exportCombinations'. BUG FIXES o Proper computation of fold enrichments, with < 1 indicating depletion and > 1 indicating enrichment. DEPRECATED AND DEFUNCT o 'changePostCutoff'. o 'plotFoldEnrichment'. o 'exportBinnedData', 'exportUnivariates', 'exportMultivariates', 'exportCombinedMultivariates'.