To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BSgenome.Drerio.UCSC.danRer10")

In most cases, you don't need to download the package archive at all.

BSgenome.Drerio.UCSC.danRer10

   

This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see BSgenome.Drerio.UCSC.danRer10.

Full genome sequences for Danio rerio (UCSC version danRer10)

Bioconductor version: 3.4

Full genome sequences for Danio rerio (Zebrafish) as provided by UCSC (danRer10, Sep. 2014) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Drerio.UCSC.danRer10")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BSgenome.Drerio.UCSC.danRer10")

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, BSgenome, Danio_rerio, Genetics
Version 1.4.2
License Artistic-2.0
Depends BSgenome(>= 1.36.0)
Imports BSgenome
LinkingTo
Suggests GenomicFeatures
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me CNEr

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BSgenome.Drerio.UCSC.danRer10_1.4.2.tar.gz
Windows Binary
Mac OS X 10.9 (Mavericks)
Package Short Url http://bioconductor.org/packages/BSgenome.Drerio.UCSC.danRer10/
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