%PDF-1.4 % 1 0 obj << /S /GoTo /D (section.1) >> endobj 4 0 obj (Introduction) endobj 5 0 obj << /S /GoTo /D (section.2) >> endobj 8 0 obj (COSNet) endobj 9 0 obj << /S /GoTo /D (section.3) >> endobj 12 0 obj (An Example of the Usage of COSNet for the Functional Classification of Yeast Genes with the Functional Catalogue) endobj 13 0 obj << /S /GoTo /D (subsection.3.1) >> endobj 16 0 obj (Data Loading) endobj 17 0 obj << /S /GoTo /D (subsection.3.2) >> endobj 20 0 obj (Predicting Labels for Unlabeled Nodes with COSNet) endobj 21 0 obj << /S /GoTo /D (subsection.3.3) >> endobj 24 0 obj (Processing the Results) endobj 25 0 obj << /S /GoTo /D (subsection.3.4) >> endobj 28 0 obj (Assessing COSNet Performance) endobj 29 0 obj << /S /GoTo /D (section.4) >> endobj 32 0 obj (An Example of the Usage of COSNet for Inferring Gene Ontology Labels for Fly Genes) endobj 33 0 obj << /S /GoTo /D (subsection.4.1) >> endobj 36 0 obj (Data Loading) endobj 37 0 obj << /S /GoTo /D (subsection.4.2) >> endobj 40 0 obj (Predicting GO Labels with COSNet) endobj 41 0 obj << /S /GoTo /D (subsection.4.3) >> endobj 44 0 obj (Result Evaluation) endobj 45 0 obj << /S /GoTo /D (section.5) >> endobj 48 0 obj (Usage of COSNet for Predicting Therapeutical Categories of Drugs) endobj 49 0 obj << /S /GoTo /D (subsection.5.1) >> endobj 52 0 obj (Loading the data) endobj 53 0 obj << /S /GoTo /D (subsection.5.2) >> endobj 56 0 obj (Learning the Model Parameters) endobj 57 0 obj << /S /GoTo /D (subsection.5.3) >> endobj 60 0 obj (Running the Sub-network of Unlabeled Nodes to Infer Labels) endobj 61 0 obj << /S /GoTo /D (subsection.5.4) >> endobj 64 0 obj (Extracting Predictions) endobj 65 0 obj << /S /GoTo /D (subsection.5.5) >> endobj 68 0 obj (Cross Validating COSNet in Predicting Drug Therapeutical Categories) endobj 69 0 obj << /S /GoTo /D [70 0 R /Fit] >> endobj 84 0 obj << /Length 1674 /Filter /FlateDecode >> stream xXKoFWHo=5qb#Ebhz%6*E%6,Q)ЃrvgۙozuűW3gF{7\ʹY,r[rt4Iݥ_a,tV0S,S:w%/ҹU*NS'$v] MtKoe+|ϸ}@kfs3K:g+މU:7>0Ȩ70ZF' mJ=Ӡ{2fҙՆyOK lcBr&vQO*miy՟BLFRS$]};ǧ\\|>绁%J%7ϴ3-5z3!3͝Ί mZuoSPk>IE77-Zte͵ͼ+YGrY#~[}VƤN$Īr[& "F{?q\fSdgN?m" hP1F8pvu$h(F0xd3E { +g2E\<+ ¤hh1ܓ%whi`¡K[2-ͻ Ǩmُ/EjD;9O 2u#_nuxVŶ/<(*w ==ߐ)Lb0N;1p.7x7ڃp5m7$gl+Ua(Py^"(m{8&"ʈ]a9)t Jc+<0D< BqI,vw݊,aZVAJ m/r&*Ю\+}a`Ɇ'nheNJ
9m:~]AvM̺S͊%Fa-!P{8@~9]KXiaN_jȔ7ۀs3ҳ'W_qdCs%W)PMlc&|?U1-$)_ь53@t$`>jhk JCNN%ة1}o
LDfM1!<4Xey%oD"ܯm"8K>J٫9e>w療1wf$o2˸`p@+Fe,7|5@˷(Yike@K|i M&-&W=@q8ђa5FPAGUG$Hڨg"Sb+!T)1zTQ'v
'L)V @pJ/ex_(@`Ё11F9R˿
LHchSW&$^B2Dv(Evhi&ܤ
ѱþ(Q%N xI>y>:Ƨ46yOZ!+L{B,8.byɀE_l>03L^t<ʃ* F#-m з琒{Ar5`2~"sl >JYq mi;=U4F?9cZff /yg}
-Y!hO YL/߭O8K
B
qlrcEFh2cx:hx峿 H
endstream
endobj
70 0 obj <<
/Type /Page
/Contents 84 0 R
/Resources 83 0 R
/MediaBox [0 0 595.276 841.89]
/Parent 100 0 R
/Annots [ 71 0 R 72 0 R 73 0 R 98 0 R 74 0 R 75 0 R 76 0 R 77 0 R 78 0 R 99 0 R 79 0 R 80 0 R 81 0 R ]
>> endobj
71 0 obj <<
/Type /Annot
/Subtype /Link
/Border[0 0 1]/H/I/C[1 0 0]
/Rect [116.832 328.507 204.274 338.027]
/A << /S /GoTo /D (section.1) >>
>> endobj
72 0 obj <<
/Type /Annot
/Subtype /Link
/Border[0 0 1]/H/I/C[1 0 0]
/Rect [116.832 304.048 181.049 313.568]
/A << /S /GoTo /D (section.2) >>
>> endobj
73 0 obj <<
/Type /Annot
/Subtype /Link
/Border[0 0 1]/H/I/C[1 0 0]
/Rect [116.832 277.474 477.479 289.11]
/A << /S /GoTo /D (section.3) >>
>> endobj
98 0 obj <<
/Type /Annot
/Subtype /Link
/Border[0 0 1]/H/I/C[1 0 0]
/Rect [116.832 263.925 458.051 275.561]
/A << /S /GoTo /D (section.3) >>
>> endobj
74 0 obj <<
/Type /Annot
/Subtype /Link
/Border[0 0 1]/H/I/C[1 0 0]
/Rect [133.195 250.375 225.689 262.055]
/A << /S /GoTo /D (subsection.3.1) >>
>> endobj
75 0 obj <<
/Type /Annot
/Subtype /Link
/Border[0 0 1]/H/I/C[1 0 0]
/Rect [133.195 236.826 413.3 248.506]
/A << /S /GoTo /D (subsection.3.2) >>
>> endobj
76 0 obj <<
/Type /Annot
/Subtype /Link
/Border[0 0 1]/H/I/C[1 0 0]
/Rect [133.195 223.277 267.699 234.957]
/A << /S /GoTo /D (subsection.3.3) >>
>> endobj
77 0 obj <<
/Type /Annot
/Subtype /Link
/Border[0 0 1]/H/I/C[1 0 0]
/Rect [133.195 209.728 311.903 221.408]
/A << /S /GoTo /D (subsection.3.4) >>
>> endobj
78 0 obj <<
/Type /Annot
/Subtype /Link
/Border[0 0 1]/H/I/C[1 0 0]
/Rect [116.832 185.27 477.479 196.906]
/A << /S /GoTo /D (section.4) >>
>> endobj
99 0 obj <<
/Type /Annot
/Subtype /Link
/Border[0 0 1]/H/I/C[1 0 0]
/Rect [116.832 171.72 303.284 183.356]
/A << /S /GoTo /D (section.4) >>
>> endobj
79 0 obj <<
/Type /Annot
/Subtype /Link
/Border[0 0 1]/H/I/C[1 0 0]
/Rect [133.195 158.171 225.689 169.851]
/A << /S /GoTo /D (subsection.4.1) >>
>> endobj
80 0 obj <<
/Type /Annot
/Subtype /Link
/Border[0 0 1]/H/I/C[1 0 0]
/Rect [133.195 144.622 333.065 156.302]
/A << /S /GoTo /D (subsection.4.2) >>
>> endobj
81 0 obj <<
/Type /Annot
/Subtype /Link
/Border[0 0 1]/H/I/C[1 0 0]
/Rect [133.195 133.189 245.707 142.753]
/A << /S /GoTo /D (subsection.4.3) >>
>> endobj
85 0 obj <<
/D [70 0 R /XYZ 116.828 752.957 null]
>> endobj
86 0 obj <<
/D [70 0 R /XYZ 117.828 715.095 null]
>> endobj
92 0 obj <<
/D [70 0 R /XYZ 117.828 484.78 null]
>> endobj
95 0 obj <<
/D [70 0 R /XYZ 117.828 371.894 null]
>> endobj
83 0 obj <<
/Font << /F50 87 0 R /F56 88 0 R /F21 89 0 R /F15 90 0 R /F63 91 0 R /F65 93 0 R /F70 94 0 R /F72 96 0 R /F75 97 0 R >>
/ProcSet [ /PDF /Text ]
>> endobj
108 0 obj <<
/Length 3367
/Filter /FlateDecode
>>
stream
xZKsW) ă$ۇxc'Nm6X>P3iP
G_~ T*AݍןF]Re+7WR6*{ՔFH]_]~*ŲUUn!bijYaY|RTV(J^
~-HPUlvg08_,uY4NSwq&ٸZJSV0Т2-r-݂_,UmhY]t*+6QxsȖ_k]ǪXwx-U[~L`gdeVFVzﻓ~;,US{xeZ3t&L]rVfd;́DA,2^S<%N A(Bª9nx)tqvX;v6R0uwtʣoFC|)𤌥"пtn