CHANGES IN VERSION 0.99.10
--------------------------
o Reworded the correlate_sample_scores() error handler message ("Invalid
  correlation for ..." instead of "Error in correlation for ...") so it no
  longer triggers the BiocCheck note about redundant 'stop' and 'warn*' wording
  in signal conditions.
o Used <- instead of = for the two remaining top-level assignments in the
  vignette (colors and emt_names), clearing the lintr assignment_linter output.

CHANGES IN VERSION 0.99.8
-------------------------
o Version bump to re-trigger the build after a transient missing-dependency
  error (GSVA / ScaledMatrix / BiocSingular) on the Bioconductor build system;
  no package code changes.

CHANGES IN VERSION 0.99.7
-------------------------
o Subset the bundled filtered.c2.gmt gene-set file to 500 representative
  pathways so the vignette (and R CMD check) completes well within the
  10-minute time limit; the pathway-correlation example is unchanged in spirit.

CHANGES IN VERSION 0.99.6
-------------------------
o Removed the non-standard 'BiocType' DESCRIPTION field that triggered an
  "Unknown or non-standard DESCRIPTION field(s)" warning in R CMD check; the
  package is already declared as Software via biocViews.

CHANGES IN VERSION 0.99.5
-------------------------
o Further Bioconductor review responses:
o Replaced the remaining import() directives with selective importFrom(),
  keeping import() only where whole-package access is required (ggplot2, and
  mclust / Matrix for S4 method dispatch).
o Replaced direct Seurat @meta.data slot access with accessors ([[ ]],
  AddMetaData) in the single-cell scoring functions.
o Vignette now saves and restores the user's options() and adds a comparison
  to related Bioconductor gene-set scoring packages in the Introduction.
o Added inst/script/make-data.R documenting the provenance and creation of
  every data/ object, referenced from each data man page.
o Fixed the orientation of Execute_SCSE_parallel() so its output matches the
  other parallel scorers (samples x gene sets).

CHANGES IN VERSION 0.99.4
-------------------------
o Responded to the Bioconductor package review:
o Rewrote Title and Description without single quotes and wrapped them.
o Wrapped Authors@R and added the maintainer ORCID and funder (fnd) entries.
o Added 'BiocType: Software' and replaced the data-experiment biocViews with
  Software biocViews.
o Switched parallel execution to BiocParallel and file downloads to
  BiocFileCache.
o Read GMT gene sets with GSEABase and removed the redundant custom reader.
o Vectorised correlate_sample_scores() and removed blanket tryCatch() calls
  and utils::globalVariables().
o Reworked the vignette to use BiocStyle, a generated table of contents and an
  installation section, and to demonstrate SummarizedExperiment /
  SingleCellExperiment input.
o Expanded the unit test suite and moved Figure1.png to man/figures.

CHANGES IN VERSION 0.99.1
-------------------------
o Development iterations before the Bioconductor review: refined function
  documentation and examples, corrected gene set file names, and updated the
  vignette.

CHANGES IN VERSION 0.99.0
-------------------------
o Submitted to Bioconductor.
