SpatialeXpressionR: Cell Type Identification in Spatial
Transcriptomics
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Documentation for package ‘spacexr’ version 1.0.0
Help Pages
| spacexr-package | spacexr: Cell Type Identification in Spatial Transcriptomics |
| createRctd | Preprocess data before RCTD |
| plotAllWeights | Plot pie charts of cell type proportions across pixels |
| plotCellTypeWeight | Plot pixel proportions for a specific cell type |
| rctdSim | Simulated spatial transcriptomics dataset |
| runRctd | Run RCTD algorithm to decompose cell type mixtures |
| spacexr | spacexr: Cell Type Identification in Spatial Transcriptomics |