Transcriptome CUTteR


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Documentation for package ‘txcutr’ version 1.13.0

Help Pages

.clipTranscript Clip Transcript to Given Length
.fillReduce Convert GRanges to Single Range
.mutateEach-method Efficient Metadata Columns Mutation
.propagateMap Propagate Transcript Merge Map
exportFASTA Export Transcriptome as FASTA
exportGTF Export GTF
exportMergeTable Export Merge Table for Transcriptome
generateMergeTable Generate Merge Table
generateMergeTable-method Generate Merge Table
truncateTxome Truncate Transcriptome
truncateTxome-method Truncate Transcriptome
txdbToGRangesList Convert TxDb object to GRangesList