Combination Connectivity Mapping

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Documentation for package ‘ccmap’ version 1.34.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

get_dprimes	Extract unbiased effect sizes from meta-analysis by crossmeta.
query_combos	Get overlap between query and predicted drug combination signatures.
query_drugs	Get correlation between query and drug signatures. Determines the pearson correlation between the query and each drug signature. Drugs with the largest positive and negative pearson correlation are predicted to, respectively, mimic and reverse the query signature. Values range from +1 to -1.
sum_rowcolCumsum	Sum of cumulative sum computed over rows then columns of matrix.