as.matrix-method | DistSum class |
channelSummaryStats | Summary statistics per channel computation |
colnames-method | DistSum class |
colnames<--method | DistSum class |
computeMetricMDS | metric MDS projection of sample |
dim-method | DistSum class |
dimnames-method | DistSum class |
dimnames<--method | DistSum class |
distByFeature | DistSum class |
DistSum | DistSum class |
DistSum-class | DistSum class |
DistSum-method | DistSum class |
eigenVals | MDS class |
EMDDist | Calculate Earth Mover's distance between two samples |
featureNames-method | DistSum class |
featureNames<--method | DistSum class |
ggplotDistFeatureImportance | Plot of feature relative importance in distance |
ggplotMarginalDensities | Plot of channel intensity marginal densities |
ggplotSampleMDS | Plot of Metric MDS object |
ggplotSampleMDSShepard | Plot of Metric MDS object - Shepard diagram |
ggplotSampleMDSWrapBiplots | SampleMDS biplot wrapping |
GoF | MDS class |
MDS-class | MDS class |
ncol-method | DistSum class |
nDim | MDS class |
nFeatures | DistSum class |
nPoints | MDS class |
nrow-method | DistSum class |
pairwiseEMDDist | Pairwise Earth Mover's Distance calculation |
pctvar | MDS class |
projDist | MDS class |
projections | MDS class |
pwDist | MDS class |
rownames-method | DistSum class |
rownames<--method | DistSum class |
RSq | MDS class |
RSqVec | MDS class |
show-method | DistSum class |
show-method | MDS class |
smacofRes | MDS class |
spp | MDS class |
stress | MDS class |
[-method | DistSum class |