To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ceu1kg")

In most cases, you don't need to download the package archive at all.

ceu1kg

   

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see ceu1kg.

CEU (N=60) genotypes from 1000 genomes pilot phase I

Bioconductor version: 3.2

CEU genotypes from 1000 genomes "low coverage" pilot phase I (approx 8 million SNP calls released July 2010); includes Wellcome trust GENEVAR expression for 43 indiv

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("ceu1kg")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ceu1kg")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ceu1kg")

 

PDF ceu1kg overview
PDF   Reference Manual

Details

biocViews ExperimentData, HapMap, Project1000genomes, SNPData
Version 0.8.0
License Artistic-2.0
Depends R (>= 2.12.0), GGBase(>= 3.9.0), GGtools, Biobase
Imports
LinkingTo
Suggests SNPlocs.Hsapiens.dbSNP.20101109
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source ceu1kg_0.8.0.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source (username/password: readonly)
Package Short Url http://bioconductor.org/packages/ceu1kg/
Package Downloads Report Download Stats

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