To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ProteomicsAnnotationHubData")

In most cases, you don't need to download the package archive at all.

ProteomicsAnnotationHubData

   

This package is for version 3.2 of Bioconductor; for the stable, up-to-date release version, see ProteomicsAnnotationHubData.

Transform public proteomics data resources into Bioconductor Data Structures

Bioconductor version: 3.2

These recipes convert a variety and a growing number of public proteomics data sets into easily-used standard Bioconductor data structures.

Author: Gatto Laurent [aut, cre], Sonali Arora [aut]

Maintainer: Laurent Gatto <lg390 at cam.ac.uk>

Citation (from within R, enter citation("ProteomicsAnnotationHubData")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ProteomicsAnnotationHubData")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ProteomicsAnnotationHubData")

 

HTML Proteomics Data in Annotation Hub
PDF   Reference Manual
Text   NEWS

Details

biocViews DataImport, Proteomics, Software
Version 1.0.1
In Bioconductor since BioC 3.2 (R-3.2) (0.5 years)
License Artistic-2.0
Depends AnnotationHub(>= 2.1.45), AnnotationHubData
Imports mzR(>= 2.3.2), MSnbase, Biostrings, GenomeInfoDb, utils, Biobase, BiocInstaller, RCurl
LinkingTo
Suggests knitr, BiocStyle, rmarkdown, testthat
SystemRequirements
Enhances
URL https://github.com/lgatto/ProteomicsAnnotationHubData
BugReports https://github.com/lgatto/ProteomicsAnnotationHubData/issues
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source ProteomicsAnnotationHubData_1.0.1.tar.gz
Windows Binary
Mac OS X 10.6 (Snow Leopard) ProteomicsAnnotationHubData_1.0.0.tgz
Mac OS X 10.9 (Mavericks) ProteomicsAnnotationHubData_1.0.1.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/ProteomicsAnnotationHubData/tree/release-3.2
Package Short Url http://bioconductor.org/packages/ProteomicsAnnotationHubData/
Package Downloads Report Download Stats

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