Package: bsseq
Version: 1.6.0
Title: Analyze, manage and store bisulfite sequencing data
Description: A collection of tools for analyzing and visualizing bisulfite
    sequencing data.
Authors@R: c(person(c("Kasper", "Daniel"), "Hansen", role = c("aut", "cre"),
    email = "kasperdanielhansen@gmail.com"),
    person("Peter", "Hickey", role = "ctb", email = "peter.hickey@gmail.com"))
Depends: R (>= 2.15), methods, BiocGenerics, IRanges (>= 2.1.10),
        GenomicRanges (>= 1.19.6), SummarizedExperiment (>= 0.1.1),
        parallel, GenomeInfoDb
Imports: scales, stats, graphics, Biobase, locfit, gtools, data.table,
        S4Vectors, R.utils (>= 2.0.0), matrixStats
Suggests: RUnit, bsseqData, BiocStyle
Collate: hasGRanges.R BSseq_class.R BSseqTstat_class.R BSseq_utils.R
        combine.R utils.R read.bsmooth.R read.bismark.R BSmooth.R
        BSmooth.tstat.R dmrFinder.R gof_stats.R plotting.R fisher.R
        permutations.R BSmooth.fstat.R
License: Artistic-2.0
URL: https://github.com/kasperdanielhansen/bsseq
BugReports: https://github.com/kasperdanielhansen/bsseq/issues
LazyData: yes
biocViews: DNAMethylation
NeedsCompilation: no
Packaged: 2015-10-14 03:03:25 UTC; biocbuild
Author: Kasper Daniel Hansen [aut, cre],
  Peter Hickey [ctb]
Maintainer: Kasper Daniel Hansen <kasperdanielhansen@gmail.com>
Built: R 3.2.2; ; 2015-10-14 13:41:55 UTC; unix
