In-Silico Annotation of Doublets for Single Cell RNA Sequencing Data

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Documentation for package ‘scds’ version 1.20.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

bcds	Find doublets/multiplets in UMI scRNA-seq data;
cxds	Find doublets/multiplets in UMI scRNA-seq data;
cxds_bcds_hybrid	Find doublets/multiples in UMI scRNA-seq data;
cxds_getTopPairs	Extract top-scoring gene pairs from an SingleCellExperiment where cxds has been run
get_dblCalls_ALL	Wrapper for getting doublet calls
get_dblCalls_dist	Derive doublet calls from doublset scores
get_dblCalls_ROC	Derive doublet calls from classification probabilities
sce_chcl	Example single cell experiment ('SingleCellExperiment') object