Integerated visualization of epigenomic data


[Up] [Top]

Documentation for package ‘rGenomeTracks’ version 1.10.0

Help Pages

+-method Adding genome_track Objects
epilogos_json Generate epilogo json configuration file
genome_track Plotting genomic tracks
install_pyGenomeTracks Install pyGenomeTracks Dependency
plot_gtracks Plotting genomic tracks
plot_gtracks, Plotting genomic tracks
plot_gtracks-method Plotting genomic tracks
track_bed Generate bed track
track_bedgraph Generate bedgraph track
track_bedgraph_matrix Generate bedgraph matrix track
track_bigwig Generate bigwig track
track_domains Generate domains track
track_epilogos Generate epilogos track
track_gtf Generate gtf track
track_hic_matrix Generate HiC track
track_hlines Generate a track with horizontal lines
track_links Generate links track
track_narrow_peak Generate narrow peaks track
track_scalebar Generate scalebar track
track_spacer Generate spacing track
track_vlines Overlay vertical lines from a bed file
track_x_axis Specify x_axis option for genome_track.