compounds_v1: serialization of compounds info from PharmacoDb v1
compounds_v1
tissues_v1
cell_lines_v1
datasets_v1
CCLE_drts
S4Vectors DataFrame instance
S4Vectors DataFrame instance
S4Vectors DataFrame instance
S4Vectors DataFrame instance
DRTraceSet instance
PharmacoDb Sept 2017
PharmacoDb Sept 2017
PharmacoDb Sept 2017
PharmacoDb Sept 2017
PharmacoDb April 2018
data(compounds_v1)
head(compounds_v1)
#> DataFrame with 6 rows and 2 columns
#> id name
#> <numeric> <character>
#> 1 1 (5Z)-7-Oxozeaenol
#> 2 2 16-beta-bromoandrost..
#> 3 3 17-AAG
#> 4 4 1S,3R-RSL-3
#> 5 5 3-Cl-AHPC
#> 6 6 5-FdUR
data(tissues_v1)
head(tissues_v1)
#> DataFrame with 6 rows and 2 columns
#> id name
#> <numeric> <character>
#> 1 1 adrenal_gland
#> 2 2 autonomic_ganglia
#> 3 3 biliary_tract
#> 4 4 blood
#> 5 5 bone
#> 6 6 brain
data(cell_lines_v1)
head(cell_lines_v1)
#> DataFrame with 6 rows and 2 columns
#> id name
#> <numeric> <character>
#> 1 1 105KC
#> 2 2 1321N1
#> 3 3 143B
#> 4 4 184A1
#> 5 5 184B5
#> 6 6 2004
data(datasets_v1)
head(datasets_v1)
#> DataFrame with 6 rows and 2 columns
#> id name
#> <numeric> <character>
#> 1 1 CCLE
#> 2 5 GDSC1000
#> 3 4 gCSI
#> 4 6 GRAY
#> 5 3 FIMM
#> 6 2 CTRPv2
data(CCLE_drts)
CCLE_drts
#> DRTraceSet for 5 cell lines, drug Irinotecan, dataset CCLE