SQUADD

This package is for version 3.18 of Bioconductor; for the stable, up-to-date release version, see SQUADD.

Add-on of the SQUAD Software


Bioconductor version: 3.18

This package SQUADD is a SQUAD add-on. It permits to generate SQUAD simulation matrix, prediction Heat-Map and Correlation Circle from PCA analysis.

Author: Martial Sankar, supervised by Christian Hardtke and Ioannis Xenarios

Maintainer: Martial Sankar <martial.sankar at sib.swiss>

Citation (from within R, enter citation("SQUADD")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("SQUADD")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SQUADD")
SQUADD ERK exemple PDF R Script
SQUADD HOW-TO PDF R Script
Reference Manual PDF

Details

biocViews GraphAndNetwork, Network, Software, Visualization
Version 1.52.0
In Bioconductor since BioC 2.7 (R-2.12) (13.5 years)
License GPL (>=2)
Depends R (>= 2.11.0)
Imports graphics, grDevices, methods, RColorBrewer, stats, utils
System Requirements
URL http://www.unil.ch/dbmv/page21142_en.html
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package SQUADD_1.52.0.tar.gz
Windows Binary SQUADD_1.52.0.zip
macOS Binary (x86_64) SQUADD_1.52.0.tgz
macOS Binary (arm64) SQUADD_1.52.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/SQUADD
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/SQUADD
Bioc Package Browser https://code.bioconductor.org/browse/SQUADD/
Package Short Url https://bioconductor.org/packages/SQUADD/
Package Downloads Report Download Stats