Gene signature generation for functionally validated signaling
pathways
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Documentation for package ‘sigsquared’ version 1.34.0
Help Pages
| analysisPipeline | Training of thresholds |
| analysisPipeline-method | Class '"geneSignature"' |
| BrCa443 | Breast Cancer 443 Data Set |
| ensembleAdjustable | Application of geneSignature object |
| ensembleAdjustable-method | Class '"geneSignature"' |
| geneSignature-class | Class '"geneSignature"' |
| getDirect | geneSignature functions |
| getDirect-method | Class '"geneSignature"' |
| getGenes | geneSignature functions |
| getGenes-method | Class '"geneSignature"' |
| getNGenes | geneSignature functions |
| getNGenes-method | Class '"geneSignature"' |
| getThresholds | geneSignature functions |
| getThresholds-method | Class '"geneSignature"' |
| setDirect | geneSignature functions |
| setDirect-method | Class '"geneSignature"' |
| setGenes | geneSignature functions |
| setGenes-method | Class '"geneSignature"' |
| setGeneSignature | geneSignature functions |
| setGeneSignature-method | Class '"geneSignature"' |
| setThresholds | geneSignature functions |
| setThresholds-method | Class '"geneSignature"' |
| sigsquared | The sigsquared package |