Wrappers to Save Common File Formats
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Documentation for package ‘alabaster.files’ version 1.0.0
Help Pages
| BamIndexWrapper | Wrapper for a BAM index file |
| BamIndexWrapper-class | Wrapper for a BAM index file |
| BamWrapper | Wrapper for a BAM file |
| BamWrapper-class | Wrapper for a BAM file |
| BedWrapper | Wrapper for a BED file |
| BedWrapper-class | Wrapper for a BED file |
| BgzipIndexWrapper | Wrapper for a Bgzip index file |
| BgzipIndexWrapper-class | Wrapper for a Bgzip index file |
| BigBedWrapper | Wrapper for a bigBed file |
| BigBedWrapper-class | Wrapper for a bigBed file |
| BigWigWrapper | Wrapper for a bigWig file |
| BigWigWrapper-class | Wrapper for a bigWig file |
| CompressedIndexedWrapper-class | Virtual wrapper classes |
| CompressedWrapper-class | Virtual wrapper classes |
| compression | Virtual wrapper classes |
| FaIndexWrapper | Wrapper for a FASTA index file |
| FaIndexWrapper-class | Wrapper for a FASTA index file |
| FastaWrapper | Wrapper for a FASTA file |
| FastaWrapper-class | Wrapper for a FASTA file |
| FastqWrapper | Wrapper for a FASTQ file |
| FastqWrapper-class | Wrapper for a FASTQ file |
| GffWrapper | Wrapper for a GFF file |
| GffWrapper-class | Wrapper for a GFF file |
| GmtWrapper | Wrapper for a GMT file |
| GmtWrapper-class | Wrapper for a GMT file |
| index | Virtual wrapper classes |
| index-method | Virtual wrapper classes |
| IndexedWrapper-class | Virtual wrapper classes |
| loadBamIndexWrapper | Wrapper for a BAM index file |
| loadBamWrapper | Wrapper for a BAM file |
| loadBedWrapper | Wrapper for a BED file |
| loadBgzipIndexWrapper | Wrapper for a Bgzip index file |
| loadBigBedWrapper | Wrapper for a bigBed file |
| loadBigWigWrapper | Wrapper for a bigWig file |
| loadFaIndexWrapper | Wrapper for a FASTA index file |
| loadFastaWrapper | Wrapper for a FASTA file |
| loadFastqWrapper | Wrapper for a FASTQ file |
| loadGffWrapper | Wrapper for a GFF file |
| loadGmtWrapper | Wrapper for a GMT file |
| loadTabixIndexWrapper | Wrapper for a Tabix file |
| loadVcfWrapper | Wrapper for a GFF file |
| path | Virtual wrapper classes |
| path-method | Virtual wrapper classes |
| show-method | Wrapper for a FASTA file |
| show-method | Wrapper for a FASTQ file |
| show-method | Virtual wrapper classes |
| stageObject-method | Wrapper for a BAM index file |
| stageObject-method | Wrapper for a BAM file |
| stageObject-method | Wrapper for a BED file |
| stageObject-method | Wrapper for a Bgzip index file |
| stageObject-method | Wrapper for a bigBed file |
| stageObject-method | Wrapper for a bigWig file |
| stageObject-method | Wrapper for a FASTA index file |
| stageObject-method | Wrapper for a FASTA file |
| stageObject-method | Wrapper for a FASTQ file |
| stageObject-method | Wrapper for a GFF file |
| stageObject-method | Wrapper for a GMT file |
| stageObject-method | Wrapper for a Tabix file |
| stageObject-method | Wrapper for a GFF file |
| TabixIndexWrapper | Wrapper for a Tabix file |
| TabixIndexWrapper-class | Wrapper for a Tabix file |
| VcfWrapper | Wrapper for a GFF file |
| VcfWrapper-class | Wrapper for a GFF file |
| virtual-wrapper | Virtual wrapper classes |
| Wrapper-class | Virtual wrapper classes |