Generating Protein Sequences with Deep Generative Models

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Documentation for package ‘GenProSeq’ version 1.6.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

example_luxA	Example Data for Protein Sequences
example_PTEN	Example Data for Protein Sequences
fit_ART	Autoregressive language model with Transformer
fit_GAN	Generative adversarial network for generating protein sequences
fit_VAE	Variational autoencoder for generating protein sequences
gen_ART	Autoregressive language model with Transformer
gen_GAN	Generative adversarial network for generating protein sequences
gen_VAE	Variational autoencoder for generating protein sequences
layer_embedding_token_position	Transformer model
layer_transformer_encoder	Transformer model
prot2vec	Converting from protein sequences to vectors or vice versa.
prot_seq_check	Check a protein sequence
vec2prot	Converting from protein sequences to vectors or vice versa.