GARS: Genetic Algorithm for the identification of Robust Subsets of variables in high-dimensional and challenging datasets


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Documentation for package ‘GARS’ version 1.22.0

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GARS-package GARS package for a robust feature selection of high-dimensional data
AllPop Accessors for the 'AllPop' slot of a GarsSelectedFeatures object.
AllPop,GARS-AllPop Accessors for the 'AllPop' slot of a GarsSelectedFeatures object.
AllPop-method Accessors for the 'AllPop' slot of a GarsSelectedFeatures object.
FitScore Accessors for the 'FitScore' slot of a GarsSelectedFeatures object.
FitScore,GARS-FitScore Accessors for the 'FitScore' slot of a GarsSelectedFeatures object.
FitScore-method Accessors for the 'FitScore' slot of a GarsSelectedFeatures object.
GARS GARS package for a robust feature selection of high-dimensional data
GarsSelectedFeatures-class The output class 'GarsSelectedFeatures'
GARS_classes RNA-seq dataset for testing GARS
GARS_create_rnd_population Create a random chromosomes population
GARS_Crossover Perform the one-point and the two-point Crossover
GARS_data_norm RNA-seq dataset for testing GARS
GARS_Elitism Separate chromosome on the basis of the Fitness Scores
GARS_FitFun This function implements the Fitness Function of GARS
GARS_Fitness_score RNA-seq dataset for testing GARS
GARS_fit_list RNA-seq dataset for testing GARS
GARS_GA The wrapper fuction to use GARS
GARS_Mutation Perform the Mutation step
GARS_PlotFeaturesUsage A bubble chart to assess the usage of each features
GARS_PlotFitnessEvolution Plot the maximum fitness scores for each generation
GARS_popul RNA-seq dataset for testing GARS
GARS_pop_list RNA-seq dataset for testing GARS
GARS_res_GA A GarsSelectedFeatures object for testing GARS
GARS_Selection Perform the "Roulette Wheel" or the "Tournament" selection
LastPop Accessors for the 'LastPop' slot of a GarsSelectedFeatures object.
LastPop,GARS-LastPop Accessors for the 'LastPop' slot of a GarsSelectedFeatures object.
LastPop-method Accessors for the 'LastPop' slot of a GarsSelectedFeatures object.
MatrixFeatures Accessors for the 'MatrixFeatures' slot of a GarsSelectedFeatures object.
MatrixFeatures,GARS-MatrixFeatures Accessors for the 'MatrixFeatures' slot of a GarsSelectedFeatures object.
MatrixFeatures-method Accessors for the 'MatrixFeatures' slot of a GarsSelectedFeatures object.