SCATE: Single-cell ATAC-seq Signal Extraction and Enhancement

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Documentation for package ‘SCATE’ version 1.12.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

cellcluster	Cell clustering
extractfeature	Extract features for certain genomic regions
makedatabase	Make customized database
peakcall	Peak calling
satacprocess	Preprocess scATAC-seq
SCATE	Perform SCATE
SCATEpipeline	SCATE Pipeline