BSgenome.Alyrata.JGI.v1

DOI: 10.18129/B9.bioc.BSgenome.Alyrata.JGI.v1  

This package is for version 3.17 of Bioconductor; for the stable, up-to-date release version, see BSgenome.Alyrata.JGI.v1.

Arabidopsis lyrata full genome (JGI version V1.0)

Bioconductor version: 3.17

Arabidopsis lyrata 8x Release [project ID 4002920] as provided by JGI ( snapshot from March 24, 2011) and stored in Biostrings objects.

Author: Jian-Feng Mao and Ya-Long Guo, with acknowledgement to Detlef Weigel

Maintainer: Jian-Feng Mao <jianfeng.mao at gmail.com>

Citation (from within R, enter citation("BSgenome.Alyrata.JGI.v1")):

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Alyrata.JGI.v1")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF   Reference Manual

Details

biocViews Alyrata, AnnotationData, Genetics
Version 1.0.1
License Artistic-2.0
Depends BSgenome(>= 1.58.0)
Imports BSgenome
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BSgenome.Alyrata.JGI.v1_1.0.1.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url https://bioconductor.org/packages/BSgenome.Alyrata.JGI.v1/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: