DOI: 10.18129/B9.bioc.RcisTarget.hg19.motifDBs.cisbpOnly.500bp  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see RcisTarget.hg19.motifDBs.cisbpOnly.500bp.

RcisTarget motif databases for human (hg19) - Subset of 4.6k motifs

Bioconductor version: 3.16

RcisTarget databases: Gene-based motif rankings and annotation to transcription factors. This package contains a subset of 4.6k motifs (cisbp motifs), scored only within 500bp upstream and the TSS. See RcisTarget tutorial to download the full databases, containing 20k motifs and search space up to 10kbp around the TSS.

Author: Sara Aibar, Gert Hulselmans, Stein Aerts. Laboratory of Computational Biology, KU Leuven Center for Human Genetics. Leuven, Belgium.

Maintainer: Sara Aibar <sara.aibar at kuleuven.vib.be>

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biocViews ExperimentData, Homo_sapiens_Data
Version 1.18.0
License GPL-3
Depends R (>= 3.3)
Imports data.table
URL http://scenic.aertslab.org
Depends On Me
Imports Me
Suggests Me RcisTarget
Links To Me
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Source Package RcisTarget.hg19.motifDBs.cisbpOnly.500bp_1.18.0.tar.gz
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