DOI: 10.18129/B9.bioc.MetaGxPancreas  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see MetaGxPancreas.

Transcriptomic Pancreatic Cancer Datasets

Bioconductor version: 3.16

A collection of pancreatic Cancer transcriptomic datasets that are part of the MetaGxData package compendium. This package contains multiple pancreas cancer datasets that have been downloaded from various resources and turned into SummarizedExperiment objects. The details of how the authors normalized the data can be found in the experiment data section of the objects. Additionally, the location the data was obtained from can be found in the url variables of the experiment data portion of each SE.

Author: Michael Zon [aut], Vandana Sandhu [aut], Christopher Eeles [ctb], Benjamin Haibe-Kains [aut, cre]

Maintainer: Benjamin Haibe-Kains <benjamin.haibe.kains at>

Citation (from within R, enter citation("MetaGxPancreas")):


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HTML R Script MetaGxPancreas: A Package for Pancreatic Cancer Gene Expression Analysis
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biocViews ArrayExpress, CancerData, ExperimentData, ExperimentHub, ExpressionData, GEO, Homo_sapiens_Data, MicroarrayData, NCI, SequencingData
Version 1.18.0
License Artistic-2.0
Depends SummarizedExperiment, ExperimentHub, R (>= 3.6.0)
Imports stats, impute, S4Vectors, AnnotationHub
Suggests testthat, knitr, BiocStyle, rmarkdown, markdown
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